IDENTIFICATION AND SUSCEPTIBILITY PATTERNS OF SOME SKIN BACTERIA ISOLATES USING VITEK-2 SYSTEM
Keywords:
Vitek-2 system, bacteria; isolates; infections; skin.Abstract
The use of the automated Vitek-2 system as a sensitive tool in the identification and antibiotic susceptibility of microorganisms cannot be overemphasized especially for its fast, efficient and reliable technology. This study evaluated the Vitek-2 system for identification and susceptibility pattern of some isolated bacteria from skin infections. Two hundred and seventy-two skin swab samples from pupils with skin infections in some selected primary schools across the three geopolitical zones of Ogun State were examined for this study. Isolation and comparison of bacteria identification and susceptibility pattern were achieved using standard microbiological techniques, agar disc diffusion method and Vitek-2 system, respectively. Out of the two hundred and seventy-two (272) skin swab samples collected, twenty-eight (28) were identified to specie-level by Vitek-2 system. Staphylococcus aureus, Staphylococcus hominis, Staphylococcus cohnii, Staphylococcus saprophyticus, Staphylococcus epidermidis, Staphylococcus xylosis, Staphylococcus agalactiae and Staphylococcus lugdunensis were the definitive species of Staphylococcus identified. Staphylococcus aureus 13 (46.43%) had the highest prevalence of identity, however, Staphylococcus lugdunensis, Staphylococcus cohnii and Staphylococcus xylosis had the least occurrence of 1(3.57%) each. The isolates were highly susceptible to ciprofloxacin 24(85.71%), followed by gentamycin 21(75%) and nitrofurantoin 20(71.43%). All the isolates were absolutely resistant to benzylpenicillin 28(100%). A significant increase in the zone of inhibition of ciprofloxacin when compared with cefuroxime (F-ratio=9.325, P-value <0.05) was observed using the agar disc diffusion method. The study concluded that the Vitek-2 system is a definitive and comprehensive technique for bacteria identification and antibiotic susceptibility, thus providing rapid and accurate results while saving time and w
References
Adesoji, A., Onuh, J., Bagu, J. and Itohan, S. 2019. Prevalence and antibiogram study of Staphylococcus aureus isolated from clinical and selected drinking water of Dutsin-Ma, Katsina state, Nigeria. Afri Health Sci. 19(1): 1385-1392.
Adetayo, T., Deji-Agboola, A., Popoola, M., Atoyebi, T. and Egberongbe, K. 2014. Prevalence of methicillin resistant Staphylococcus aureus from Clinical Specimens in Ibadan, Nigeria. The International Journal of Engineering and Science. 3(9): 1-11.
Akinduti P. A., Emoh‑Robinson V., Obamoh‑Triumphant H.F., Obafemi Y. D. and Banjo T.T 2022. Antibacterial activities of plant leaf extracts against multi-antibiotic resistant Staphylococcus aureus associated with skin and soft tissue infections. BMC Complementary Medicine and Therapies. 22:47 https://doi.org/10.1186/s12906-022-03527-y
Azeez, I.A. and Owolabi, S. 2020. Incidence and Susceptibility Pattern of Clinical Isolates of Pseudomonas aeruginosa from Selected Teaching Hospitals in Southwestern Nigeria. Current Journal of Applied Science and Technology. 39(8):110-114.
Benkova, M., Soukup, O., and Marek, J. 2020. Antimicrobial susceptibility testing: currently used methods and devices and the near future in clinical practice. Journal of Applied Microbiology 129: 806-822.
Buszewski, B., Rogowska, A., Pomastowski, P., Zloch, M. and Railean-Plugaru, V. 2017. Identification of Microorganisms by Modern Analytical Techniques. Journal of AOAC international, special editor section. 100(6),1607- 1623.
Dharmappa, D., Archana, A. and Vinay, K. (2022). Oxidase Test: A Biochemical Methods in Bacterial Identification. AgriCos e-Newsletter 3:1 (11).
El-Hadedy, D. and Salwa A. 2012. Identification of Staphylococcus aureus and Escherichia coli isolated from Egyptian food by conventional and molecular methods. Journal of Genetic Engineering and Biotechnology 10:129-134
Ghalehnoo, Z.R. 2018. Diseases caused by Staphylococcus aureus. International Journal of Medical and Health Research 4(11):65-67.
Ghali-Mohammed, I., Ade-Yusuf, R.O., Adewoye, A.O., Adetona, M.A., Ahmed, O.A., Alhaji, N.B. and Odetokun, I.A. 2023. Prevalence and susceptibility profile of Staphylococcus aureus isolated from marketed milk and cheese in Ilorin, Nigeria. Journal of Sustainable Veterinary and Allied Sciences. 5(1):47-54 DOI:10.54328/covm.josvas.2023.140.
Katz, D.S. 2016. Coagulase Test Protocol. American Society for Microbiology.1-12.
Kavipriya, D., Prakash, S., Sarumathi , D., Deepashree, R. and Apurba, S. 2021. Evaluation of the Performance of Direct Susceptibility Test by VITEK-2 from Positively Flagged Blood Culture Broth for Gram-Negative Bacilli. Journal of Laboratory Physicians 13:374–379.
Khatoon, H., Archana, A. and Kalia, V. 2022. Catalase Test: A biochemical protocol for bacterial identification. AgriCos e-Newsletter 18(3):1-3.
Ligozzi, M., Bernini, C., Bonora, M., Zuliani, J. and Fontana, R. 2002. Evaluation of the VITEK 2 System for Identification and Antimicrobial Susceptibility Testing of Medically Relevant Gram-Positive Cocci. Journal of Clinical Microbiology. 40(5):1681–1686.
Mohammed, A., Adeshina, G. and Ibrahim, Y. 2013. Incidence and Antibiotic Susceptibility Pattern of Bacterial Isolates from Wound Infections in a Tertiary Hospital in Nigeria. Tropical Journal of Pharmaceutical Research. 12 (4): 617-621.
Myles, I., Jensen, R., Kelly, W., Inka, S., Karen, F. and Sandip-Datta, K. 2016. A method for culturing gram negative skin microbiota. Biomedical Central Microbiology. 16:60.
Owolabi, S. and Azeez, I.A. 2020. Investigation of Antibiotic Susceptibility Profile and R-plasmid Among Bacteria Isolated from Blood Cultures of Hospitalized Patients in Abeokuta, Ogun State, Nigeria. American Journal of Health Science. 8(2): 11-19.
Rahimi, F. and Bouzari, M. 2015. Biochemical Fingerprinting of Methicillin-Resistant S. aureus isolated from sewage and hospital in Iran. Jundishapur J Microbiol. 8(7): 2-5. e19760
Smith, A. and Hussey, M. 2016. Gram stain protocols. American society for Microbiology 3:1-9.
Stanley, C.N., Ugboma, H.A., Ibezim, E.C. and Attama, A.A. 2013. Prevalence and Antibiotic Susceptibility of Staphylococcus Aureus and Other Staphylococcal Infections in Pregnant Women Attending Antenatal Clinic in a Tertiary Hospital in Port Harcourt, Nigeria. J Infect Dis Ther 1: 125. doi:10.4172/2332-0877.1000125
Thai, T., Salisbury, B. and Zito, P. 2023. Ciprofloxacin. StatPearls Publishing (Internet). https://www.ncbi.nlm.nih.gov/books/NBK535454/ Accessed January, 2024.
Warenn, C. 2015. Introduction of the VITEK 2 Compact and Implementation of EUCAST Guidelines in a Microbiology Department (Masters dissertation). Royal College of Surgeons in Ireland, Dublin. 1-121.